Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudopuniceibacterium antarcticum HQ09
Accession NumberCP045201.1
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalomesaconate tautomerase | F3W81_14645 | Q0KJL4 | - | 3109168 - 3110226 | 36069.6 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | F3W81_14650 | G2IQQ8 | - | 3110240 - 3110911 | 23618.7 |
| catechol 2,3-dioxygenase | F3W81_14655 | P31003 | - | 3110963 - 3111916 | 35618.7 |
| pig-l domain-containing protein | F3W81_14660 | Q88JX8 | - | 3111929 - 3112660 | 27681.8 |
| lysr family transcriptional regulator | F3W81_14665 | Q88JX7 | + | 3112855 - 3114042 | 43055.6 |
| marr family transcriptional regulator | F3W81_14670 | Q88FY0 | + | 3114146 - 3114619 | 17322.2 |
| atp-binding cassette domain-containing protein | F3W81_14675 | P55469 | - | 3114747 - 3116510 | 63471.6 |
| glycogen debranching protein glgx | F3W81_14680 | P0A4Y5 | - | 3116696 - 3118750 | 76382.0 |
| glycogen synthase glga | F3W81_14685 | Q9RNH6 | - | 3118867 - 3120339 | 51874.2 |
| glucose-1-phosphate adenylyltransferase | F3W81_14690 | A3PJX6 | - | 3120374 - 3121645 | 46888.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.