Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | F3W81_07845 | Q8YDC6 | - | 1649280 - 1650185 | 31585.7 |
| eal domain-containing protein | F3W81_07850 | P77473 | + | 1650591 - 1652321 | 63262.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | F3W81_07855 | Q0K998 | - | 1652417 - 1653508 | 39111.7 |
| abc transporter permease subunit | F3W81_07860 | O58967 | - | 1653514 - 1654416 | 32959.1 |
| abc transporter permease subunit | F3W81_07865 | O58968 | - | 1654409 - 1655281 | 32265.1 |
| extracellular solute-binding protein | F3W81_07870 | O06875 | - | 1655349 - 1656593 | 44282.0 |
| diguanylate cyclase | F3W81_07875 | Q9ABX9 | + | 1657109 - 1658380 | 46852.6 |
| response regulator | F3W81_07880 | G3XCY6 | + | 1658483 - 1659214 | 26814.5 |
| sensor histidine kinase | F3W81_07885 | Q9HZ47 | + | 1659228 - 1660679 | 51747.9 |
| pyrroline-5-carboxylate reductase | F3W81_07890 | P22008 | + | 1660740 - 1661555 | 27985.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
