Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudopuniceibacterium antarcticum HQ09
Accession NumberCP045201.1
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase fabz | F3W81_05210 | Q166E7 | - | 1109852 - 1110319 | 17114.1 |
| hypothetical protein | F3W81_05215 | Not Available | - | 1110580 - 1111113 | 19702.4 |
| outer membrane protein assembly factor bama | F3W81_05220 | C6V5K2 | - | 1111123 - 1113480 | 86082.7 |
| rip metalloprotease rsep | F3W81_05225 | Q92Q49 | - | 1113692 - 1115053 | 47672.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | F3W81_05230 | Q5LSU9 | - | 1115053 - 1116237 | 41546.9 |
| phosphatidate cytidylyltransferase | F3W81_05235 | Q8YHH2 | - | 1116241 - 1117029 | 27956.4 |
| di-trans,poly-cis-decaprenylcistransferase | F3W81_05240 | Q8UFL9 | - | 1117047 - 1117778 | 27083.4 |
| ribosome recycling factor | F3W81_05245 | Q1GGS0 | - | 1117843 - 1118406 | 21044.1 |
| ump kinase | F3W81_05250 | Q166F6 | - | 1118570 - 1119313 | 27184.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | F3W81_05255 | A8LK35 | + | 1119409 - 1120284 | 31689.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.