Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paraburkholderia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Paraburkholderia |
| Species | Paraburkholderia dioscoreae |
| Strain | Msb3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paraburkholderia dioscoreae Msb3
Accession NumberLR699553.1
Gene Summary
Adenine Count
834166 bp
Thymine Count
836680 bp
Guanine Count
1404984 bp
Cytosine Count
1404167 bp
Genome Length
4479997 bp
Protein-coding Genes
4317 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| surface lipoprotein | PDMSB3_3363 | P43262 | + | 3489836 - 3490852 | 34681.5 |
| hopanoid-associated phosphorylase | PDMSB3_3364 | Not Available | - | 3490923 - 3491654 | 24667.9 |
| squalene--hopene cyclase | PDMSB3_3365 | P54924 | - | 3491658 - 3493682 | 74927.4 |
| hydroxysqualene dehydroxylase | PDMSB3_3366 | Q6N3F3 | - | 3493679 - 3494947 | 44923.3 |
| presqualene diphosphate synthase | PDMSB3_3367 | Q6N3F2 | - | 3494952 - 3495800 | 31458.8 |
| diguanylate cyclase (ggdef domain) with pas/pac sensor | PDMSB3_3368 | A0A0H2ZJS2 | - | 3496074 - 3497012 | 35415.4 |
| chemotaxis protein chec -- inhibitor of mcp methylation | PDMSB3_3369 | Q9X006 | - | 3497009 - 3497632 | 22459.1 |
| response regulator with chey-like receiver, aaa-type atpase, and dna-binding domains | PDMSB3_3370 | Q56312 | - | 3497625 - 3497993 | 13402.4 |
| protein of unknown function | PDMSB3_3371 | Not Available | + | 3498159 - 3498479 | 11692.0 |
| signal transduction histidine kinase | PDMSB3_3372 | P0DOA0 | + | 3498774 - 3500987 | 80076.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.