Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paraburkholderia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Paraburkholderia |
| Species | Paraburkholderia dioscoreae |
| Strain | Msb3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paraburkholderia dioscoreae Msb3
Accession NumberLR699553.1
Gene Summary
Adenine Count
834166 bp
Thymine Count
836680 bp
Guanine Count
1404984 bp
Cytosine Count
1404167 bp
Genome Length
4479997 bp
Protein-coding Genes
4317 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 3-beta-hydroxycholanate 3-dehydrogenase (nad(+)) 1 | PDMSB3_3323 | C8WJW0 | + | 3450682 - 3451449 | 26671.6 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PDMSB3_3324 | P0AEQ5 | + | 3451641 - 3452444 | 29572.6 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PDMSB3_3325 | P0AEQ8 | + | 3452547 - 3453221 | 24142.0 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PDMSB3_3326 | O34606 | + | 3453221 - 3453967 | 27390.6 |
| putative enzyme | PDMSB3_3327 | P27675 | + | 3454044 - 3454628 | 21878.6 |
| glycine/d-amino acid oxidase, deaminating | PDMSB3_3328 | P40875 | - | 3454662 - 3455798 | 39786.8 |
| nadph dehydrogenase | PDMSB3_3329 | Q5KXG9 | - | 3455836 - 3456966 | 40169.0 |
| dihydrodipicolinate synthase | PDMSB3_3330 | A6LA57 | - | 3456974 - 3457915 | 34489.1 |
| outer membrane protein (porin) | PDMSB3_3331 | Q04064 | + | 3458335 - 3459465 | 40611.2 |
| glycine/d-amino acid oxidase, deaminating | PDMSB3_3332 | Q5L2C2 | - | 3459545 - 3460735 | 42378.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.