Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5007 domain-containing protein | FKX85_08790 | Not Available | + | 2174010 - 2175116 | 41269.1 |
| hypothetical protein | FKX85_08795 | Q8KET0 | - | 2175209 - 2175421 | 8140.79 |
| susc/raga family tonb-linked outer membrane protein | FKX85_08800 | T2KMI3 | + | 2176067 - 2179471 | 126243.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_08805 | T2KPM5 | + | 2179484 - 2181022 | 57837.9 |
| hypothetical protein | FKX85_08810 | Not Available | + | 2181046 - 2181684 | 24215.4 |
| duf5007 domain-containing protein | FKX85_08815 | Not Available | + | 2181697 - 2182806 | 41396.1 |
| site-specific tyrosine recombinase xerd | FKX85_08820 | Q5HFS5 | - | 2183022 - 2183927 | 34650.3 |
| type ii 3-dehydroquinate dehydratase | FKX85_08825 | Q8KD64 | + | 2184145 - 2184564 | 15567.7 |
| alanine--glyoxylate aminotransferase family protein | FKX85_08830 | C1ATN6 | + | 2184577 - 2185632 | 39501.2 |
| marc family protein | FKX85_08835 | Q8K9Q4 | + | 2185690 - 2186268 | 20702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.