Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | FKX85_03940 | T2KM18 | + | 949982 - 953359 | 126008.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_03945 | T2KNB8 | + | 953364 - 954989 | 60246.6 |
| fucose isomerase | FKX85_03950 | Not Available | + | 955419 - 956846 | 52714.2 |
| transketolase | FKX85_03955 | A6KXB4 | + | 956914 - 957753 | 30934.6 |
| transketolase family protein | FKX85_03960 | A6KXB3 | + | 957753 - 958712 | 34061.1 |
| d-ribose abc transporter substrate-binding protein | FKX85_03965 | B1G898 | + | 958775 - 959725 | 34175.7 |
| duf2291 domain-containing protein | FKX85_03970 | Not Available | + | 959994 - 960659 | 24698.4 |
| sugar abc transporter atp-binding protein | FKX85_03975 | Q9X051 | + | 960646 - 962163 | 55786.6 |
| ribose abc transporter permease | FKX85_03980 | P36948 | + | 962355 - 963311 | 32991.6 |
| glycerol kinase glpk | FKX85_03985 | Q3AB25 | + | 963405 - 964901 | 54004.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.