Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | FKX85_03890 | Q9RVE7 | - | 939207 - 939512 | 11874.4 |
| tyrosine-type recombinase/integrase | FKX85_03895 | B4SDZ2 | - | 939544 - 940428 | 34172.5 |
| 30s ribosomal protein s21 | FKX85_03900 | Q11PN0 | - | 940483 - 940677 | 7717.42 |
| holliday junction branch migration dna helicase ruvb | FKX85_03905 | Q11Y53 | + | 940976 - 942013 | 38199.6 |
| trna epoxyqueuosine(34) reductase queg | FKX85_03910 | G0J2F8 | + | 942048 - 943025 | 37482.8 |
| diaminopimelate decarboxylase | FKX85_03915 | O27390 | - | 943619 - 944851 | 45245.8 |
| hypothetical protein | FKX85_03920 | Not Available | - | 945002 - 945646 | 24578.3 |
| hamp domain-containing histidine kinase | FKX85_03925 | Q08408 | + | 945878 - 947557 | 64164.9 |
| response regulator transcription factor | FKX85_03930 | Q9AE24 | + | 947554 - 948252 | 26631.4 |
| duf4974 domain-containing protein | FKX85_03935 | Not Available | + | 948890 - 949927 | 39785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.