Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | FKX85_14740 | P17315 | + | 3725840 - 3728146 | 86089.1 |
| hypothetical protein | FKX85_14745 | Not Available | + | 3728563 - 3729168 | 22038.8 |
| hypothetical protein | FKX85_14750 | Not Available | + | 3730520 - 3731143 | 23547.3 |
| alpha-ketoglutarate-dependent dioxygenase alkb | FKX85_14755 | Q32L00 | - | 3731158 - 3731760 | 23169.7 |
| phenylacetic acid degradation protein | FKX85_14760 | Q5XM24 | - | 3732798 - 3734135 | 50630.4 |
| metallophosphoesterase family protein | FKX85_14765 | Q6ZNF0 | + | 3734269 - 3735615 | 50751.4 |
| aldehyde reductase | FKX85_14770 | Q9UT59 | + | 3736440 - 3737459 | 37418.4 |
| crp/fnr family transcriptional regulator | FKX85_14775 | Not Available | + | 3737461 - 3738042 | 21919.4 |
| transcription initiation protein | FKX85_14780 | Not Available | + | 3738160 - 3738501 | 12566.3 |
| sigma-70 family rna polymerase sigma factor | FKX85_14785 | Q52997 | + | 3738567 - 3739748 | 45140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.