Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5123 domain-containing protein | FKX85_14590 | Not Available | + | 3687046 - 3688695 | 61385.2 |
| pectate lyase | FKX85_14595 | B8NQQ7 | + | 3688774 - 3690258 | 54277.6 |
| pectin esterase | FKX85_14600 | Q9LVQ0 | + | 3690285 - 3691343 | 39319.8 |
| voc family protein | FKX85_14605 | Not Available | + | 3691353 - 3691739 | 14318.2 |
| glycoside hydrolase family 28 protein | FKX85_14610 | A7PZL3 | + | 3691851 - 3693281 | 53001.6 |
| pectate lyase | FKX85_14615 | B8NQQ7 | + | 3693268 - 3694629 | 50398.0 |
| 3-dehydro-l-gulonate 2-dehydrogenase | FKX85_14620 | Q9CLH5 | + | 3694739 - 3695749 | 36329.5 |
| gfo/idh/moca family oxidoreductase | FKX85_14625 | T2KNC8 | + | 3695746 - 3696741 | 36369.8 |
| fumarate hydratase | FKX85_14630 | Not Available | + | 3696879 - 3697577 | 26058.4 |
| duf3307 domain-containing protein | FKX85_14635 | Not Available | + | 3697574 - 3698278 | 26405.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.