Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | FKX85_14540 | P46828 | - | 3670101 - 3671147 | 39135.1 |
| glycoside hydrolase family 88 protein | FKX85_14545 | O34559 | + | 3671880 - 3673112 | 47182.5 |
| pectin esterase | FKX85_14550 | Q9LVQ0 | + | 3673177 - 3674184 | 37390.5 |
| glycosyl hydrolase 43 family protein | FKX85_14555 | Q9WXE8 | + | 3674242 - 3675876 | 60478.4 |
| glycoside hydrolase family 28 protein | FKX85_14560 | A7PZL3 | + | 3676030 - 3677724 | 61641.6 |
| rhamnogalacturonan acetylesterase | FKX85_14565 | O31523 | + | 3677727 - 3678482 | 28665.8 |
| rhamnogalacturonan acetylesterase | FKX85_14570 | O31528 | + | 3678617 - 3679408 | 30285.1 |
| carboxylesterase family protein | FKX85_14575 | Q8GXA1 | + | 3679456 - 3681354 | 70762.0 |
| tonb-dependent receptor | FKX85_14580 | T2KPJ3 | + | 3681786 - 3685076 | 121622.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_14585 | T2KNB8 | + | 3685206 - 3687014 | 68489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.