Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | FKX85_12940 | T2KM18 | + | 3260110 - 3263508 | 126061.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_12945 | Not Available | + | 3263520 - 3265577 | 77864.7 |
| duf4973 domain-containing protein | FKX85_12950 | Not Available | + | 3265590 - 3266573 | 38134.5 |
| hypothetical protein | FKX85_12955 | Q8VZ10 | + | 3266647 - 3268125 | 56605.8 |
| duf4965 domain-containing protein | FKX85_12960 | Q2U4L7 | + | 3268168 - 3270633 | 92203.9 |
| secretory protein | FKX85_12965 | Not Available | + | 3270915 - 3271595 | 25709.6 |
| glycosyltransferase family 4 protein | FKX85_12970 | P26402 | + | 3271922 - 3273085 | 44618.7 |
| wecb/taga/cpsf family glycosyltransferase | FKX85_12975 | Q6GJ34 | - | 3274052 - 3274834 | 29124.7 |
| glycosyltransferase | FKX85_12980 | P71243 | - | 3274821 - 3275906 | 41187.8 |
| hypothetical protein | FKX85_12985 | Not Available | + | 3276227 - 3277288 | 39516.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.