Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | FKX85_11440 | Q7U1Z6 | + | 2851711 - 2852334 | 24703.0 |
| duf4974 domain-containing protein | FKX85_11445 | P23485 | + | 2852725 - 2853771 | 39362.1 |
| tonb-dependent receptor | FKX85_11450 | T2KPJ3 | + | 2854022 - 2857267 | 118696.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_11455 | T2KN63 | + | 2857281 - 2858855 | 58942.3 |
| family 20 glycosylhydrolase | FKX85_11460 | P49008 | + | 2858922 - 2861216 | 86177.1 |
| glycoside hydrolase family 92 protein | FKX85_11465 | O86365 | + | 2861240 - 2863459 | 82318.1 |
| hypothetical protein | FKX85_11470 | Not Available | + | 2864246 - 2864539 | 11157.2 |
| is66 family insertion sequence element accessory protein tnpb | FKX85_11475 | P55503 | + | 2864539 - 2864886 | 13073.9 |
| is66 family transposase | FKX85_11480 | P55504 | + | 2864963 - 2866462 | 57733.1 |
| susc/raga family tonb-linked outer membrane protein | FKX85_11485 | T2KPJ3 | + | 2866820 - 2869942 | 114215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.