Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | FKX85_10290 | Not Available | + | 2567703 - 2568749 | 39548.3 |
| tonb-dependent receptor | FKX85_10295 | T2KM18 | + | 2568814 - 2572233 | 128906.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_10300 | T2KPM5 | + | 2572267 - 2573913 | 62025.9 |
| polysaccharide lyase 8 family protein | FKX85_10305 | Q59288 | + | 2573973 - 2577455 | 127014.0 |
| heparinase | FKX85_10310 | Not Available | + | 2577522 - 2579474 | 74301.8 |
| sulfatase-like hydrolase/transferase | FKX85_10315 | P50430 | - | 2579537 - 2580865 | 49767.3 |
| rna polymerase sigma-70 factor | FKX85_10320 | A3Q5U0 | + | 2581218 - 2581832 | 23862.1 |
| duf4974 domain-containing protein | FKX85_10325 | Not Available | + | 2582231 - 2583229 | 36974.5 |
| tonb-dependent receptor | FKX85_10330 | Q8A1G1 | + | 2583330 - 2586815 | 129091.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_10335 | T2KNB8 | + | 2586833 - 2588596 | 67191.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.