Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent transferase | FKX85_09890 | Q83A83 | + | 2449980 - 2451125 | 41782.1 |
| hypothetical protein | FKX85_09895 | Not Available | - | 2451130 - 2451969 | 32839.0 |
| dna mismatch repair protein muts | FKX85_09900 | A8YTJ4 | - | 2451976 - 2452932 | 36186.1 |
| deoxyribodipyrimidine photo-lyase | FKX85_09905 | Q9HQ46 | - | 2452929 - 2454224 | 50925.7 |
| translocation/assembly module tamb | FKX85_09910 | Not Available | - | 2454304 - 2458995 | 176414.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | FKX85_09915 | Q11TP2 | + | 2459002 - 2460009 | 36499.4 |
| ssra-binding protein smpb | FKX85_09920 | A0M3P0 | + | 2460049 - 2460513 | 18115.3 |
| nlpc/p60 family protein | FKX85_09925 | O35010 | + | 2460479 - 2461288 | 30398.7 |
| hnh endonuclease | FKX85_09930 | Q6NKI3 | + | 2461291 - 2461806 | 19521.8 |
| hypothetical protein | FKX85_09935 | Not Available | - | 2461926 - 2462372 | 16851.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.