Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 5 protein | FKX85_09040 | W8QRE4 | - | 2222100 - 2223452 | 51348.2 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_09045 | T2KNB8 | - | 2223520 - 2225043 | 55796.9 |
| tonb-dependent receptor | FKX85_09050 | T2KPJ3 | - | 2225065 - 2228175 | 112823.0 |
| transcriptional regulator | FKX85_09055 | T2KMF4 | - | 2228384 - 2231314 | 111958.0 |
| m20/m25/m40 family metallo-hydrolase | FKX85_09060 | P80561 | + | 2232126 - 2233106 | 36423.5 |
| glucose 1-dehydrogenase | FKX85_09065 | Q9X248 | - | 2233174 - 2233929 | 26799.6 |
| alpha-glucuronidase | FKX85_09070 | B3PC73 | - | 2233940 - 2236102 | 81582.0 |
| laci family transcriptional regulator | FKX85_09075 | P46828 | - | 2236138 - 2237175 | 38104.6 |
| glycoside hydrolase family 2 protein | FKX85_09080 | T2KPJ7 | + | 2237650 - 2239713 | 79057.1 |
| mannonate dehydratase | FKX85_09085 | Q8A7U2 | + | 2239775 - 2240941 | 43576.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.