Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | FKX85_08940 | Q8R6G8 | + | 2202889 - 2204154 | 47437.1 |
| ribosome small subunit-dependent gtpase a | FKX85_08945 | Q11RI7 | + | 2204133 - 2205062 | 34926.9 |
| phosphoribosyltransferase | FKX85_08950 | A5N7G2 | + | 2205186 - 2205689 | 18805.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | FKX85_08955 | Q11Q55 | + | 2205775 - 2206596 | 29615.0 |
| nadp-dependent isocitrate dehydrogenase | FKX85_08960 | P16100 | + | 2206949 - 2209192 | 81385.1 |
| duf1080 domain-containing protein | FKX85_08965 | Not Available | - | 2209266 - 2210024 | 28451.1 |
| c-type cytochrome | FKX85_08970 | P95339 | - | 2210078 - 2210503 | 15269.2 |
| sugar phosphate isomerase/epimerase | FKX85_08975 | A4IPB5 | - | 2210531 - 2211583 | 39238.3 |
| gfo/idh/moca family oxidoreductase | FKX85_08980 | P55480 | - | 2211773 - 2212942 | 43240.5 |
| mfs transporter | FKX85_08985 | P76417 | + | 2213225 - 2214457 | 45411.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.