Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | FKX85_07990 | Q8A1G2 | + | 1967406 - 1968902 | 56263.1 |
| hypothetical protein | FKX85_07995 | Not Available | + | 1968916 - 1969158 | 8895.76 |
| right-handed parallel beta-helix repeat-containing protein | FKX85_08000 | Not Available | + | 1969359 - 1971239 | 70644.9 |
| alpha-xylosidase | FKX85_08005 | Q5AW25 | + | 1971532 - 1973781 | 85669.0 |
| gfo/idh/moca family oxidoreductase | FKX85_08010 | Q05184 | + | 1974151 - 1975245 | 41451.6 |
| phytanoyl-coa dioxygenase family protein | FKX85_08015 | Q2TDY4 | + | 1975570 - 1976322 | 28854.3 |
| sodium/solute symporter | FKX85_08020 | Q8WWX8 | + | 1976446 - 1978032 | 58052.8 |
| bacterial alpha-l-rhamnosidase | FKX85_08025 | T2KM26 | + | 1978493 - 1980676 | 83859.8 |
| glycoside hydrolase family 2 | FKX85_08030 | Q56307 | + | 1980825 - 1983677 | 107491.0 |
| hypothetical protein | FKX85_08035 | Not Available | + | 1983847 - 1984734 | 34003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.