Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | FKX85_07790 | O34559 | + | 1880789 - 1882144 | 50325.7 |
| glycoside hydrolase family 5 protein | FKX85_07795 | P10475 | + | 1882415 - 1883389 | 36783.1 |
| tonb-dependent receptor | FKX85_07800 | T2KPJ3 | + | 1884403 - 1887669 | 119411.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_07805 | T2KNB8 | + | 1887690 - 1889558 | 69889.4 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_07810 | T2KPM5 | + | 1889883 - 1891772 | 72125.4 |
| is4 family transposase | FKX85_07815 | P55729 | - | 1892250 - 1893482 | 47756.7 |
| dienelactone hydrolase family protein | FKX85_07820 | Q7DFU6 | - | 1894196 - 1895083 | 33040.3 |
| polysaccharide deacetylase family protein | FKX85_07825 | P83513 | - | 1895403 - 1896188 | 29600.2 |
| acetylxylan esterase | FKX85_07830 | D5EXI2 | - | 1896227 - 1897528 | 48803.2 |
| glycoside hydrolase family 88 protein | FKX85_07835 | T2KPL9 | - | 1897636 - 1898760 | 43267.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.