Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | FKX85_07740 | T2KPJ3 | + | 1863402 - 1866572 | 116022.0 |
| ragb/susd family nutrient uptake outer membrane protein | FKX85_07745 | T2KNB8 | + | 1866591 - 1868105 | 56218.8 |
| family 43 glycosylhydrolase | FKX85_07750 | Not Available | + | 1868347 - 1869420 | 41313.3 |
| duf4450 domain-containing protein | FKX85_07755 | Not Available | + | 1869427 - 1873068 | 135713.0 |
| plp-dependent aminotransferase family protein | FKX85_07760 | P77730 | - | 1873917 - 1875341 | 53793.2 |
| branched-chain amino acid aminotransferase | FKX85_07765 | Q5HRJ8 | + | 1875869 - 1876936 | 39798.6 |
| sigma-70 family rna polymerase sigma factor | FKX85_07770 | Not Available | + | 1877107 - 1877646 | 21044.2 |
| hypothetical protein | FKX85_07775 | Not Available | + | 1877627 - 1877896 | 10785.2 |
| atp-dependent clp protease proteolytic subunit | FKX85_07780 | A5FRE5 | + | 1877900 - 1878553 | 23865.7 |
| rhamnogalacturonan acetylesterase | FKX85_07785 | Q5BAA2 | - | 1878761 - 1880263 | 55709.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.