Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bama/tama family outer membrane protein | FKX85_07090 | Not Available | + | 1693402 - 1694571 | 44397.8 |
| hypothetical protein | FKX85_07095 | Not Available | - | 1694592 - 1695449 | 33247.2 |
| capsule assembly wzi family protein | FKX85_07100 | Not Available | - | 1695621 - 1697312 | 64697.6 |
| hypothetical protein | FKX85_07105 | Not Available | - | 1697337 - 1698002 | 24455.6 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | FKX85_07110 | Q58899 | + | 1698256 - 1699350 | 40289.6 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | FKX85_07115 | A5D4I1 | - | 1699394 - 1701856 | 91125.2 |
| pp_01403 | FKX85_07120 | Not Available | - | 1701908 - 1702243 | Not Available |
| hypothetical protein | FKX85_07125 | Not Available | + | 1702321 - 1702674 | 13628.9 |
| m1 family metallopeptidase | FKX85_07130 | P32454 | - | 1703084 - 1705414 | 90054.3 |
| hupe/urej family protein | FKX85_07135 | Not Available | - | 1705671 - 1706252 | 21588.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.