Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola soli |
| Strain | LN3S3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola soli LN3S3
Accession NumberCP041253.1
Gene Summary
Adenine Count
1550859 bp
Thymine Count
1558905 bp
Guanine Count
1221369 bp
Cytosine Count
1219171 bp
Genome Length
5550304 bp
Protein-coding Genes
4213 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | FKX85_07040 | P55180 | - | 1682770 - 1683783 | 37008.9 |
| acyl-coa dehydrogenase | FKX85_07045 | P45867 | + | 1684019 - 1685158 | 41367.8 |
| fad:protein fmn transferase | FKX85_07050 | A5F5Y3 | + | 1685527 - 1686591 | 39515.7 |
| zinc permease | FKX85_07055 | P59889 | + | 1686594 - 1687325 | 26364.9 |
| rna polymerase sigma factor | FKX85_07060 | A0QTP2 | + | 1688180 - 1688689 | 19983.9 |
| phytoene desaturase | FKX85_07065 | A0A0A1GKA2 | + | 1688690 - 1690186 | 56304.5 |
| phytoene/squalene synthase family protein | FKX85_07070 | P54977 | + | 1690190 - 1691032 | 32546.6 |
| lycopene cyclase domain-containing protein | FKX85_07075 | Not Available | + | 1691041 - 1691748 | 27886.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | FKX85_07080 | Q11YY5 | + | 1691755 - 1692600 | 31627.9 |
| fatty acid desaturase | FKX85_07085 | Q39982 | + | 1692627 - 1693319 | 27117.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.