Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes communis |
| Strain | 5CBH24 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes communis 5CBH24
Accession NumberAP019735.1
Gene Summary
Adenine Count
681747 bp
Thymine Count
689618 bp
Guanine Count
958994 bp
Cytosine Count
970988 bp
Genome Length
3301347 bp
Protein-coding Genes
2644 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CBH24_13080 | Not Available | + | 1604950 - 1605468 | 20318.1 |
| penicillin-binding protein | A5CBH24_13090 | P0A0U8 | + | 1605471 - 1607729 | 84944.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | A5CBH24_13100 | A6L075 | + | 1607730 - 1609193 | 52862.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | A5CBH24_13110 | A6H198 | + | 1609236 - 1610483 | 46018.4 |
| hypothetical protein | A5CBH24_13120 | Not Available | + | 1610499 - 1611221 | 27688.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | A5CBH24_13130 | Q5LIJ5 | + | 1611234 - 1612586 | 49509.9 |
| rod shape-determining protein roda | A5CBH24_13140 | D7AEL2 | + | 1612653 - 1613936 | 46834.2 |
| hypothetical protein | A5CBH24_13150 | Q52778 | + | 1613926 - 1614960 | 37861.0 |
| upf0324 membrane protein | A5CBH24_13160 | Q8A6G5 | - | 1614955 - 1615965 | 35311.5 |
| malate dehydrogenase | A5CBH24_13170 | Q4FP28 | + | 1616295 - 1617287 | 35586.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.