Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii subsp. vulgaris
Accession NumberAP019737.1
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | A5CPYCFAH4_03560 | A6L8I7 | + | 389742 - 390101 | 13187.0 |
| membrane protein | A5CPYCFAH4_03570 | P54486 | + | 390221 - 390733 | 17834.2 |
| zinc protease | A5CPYCFAH4_03580 | P55679 | + | 390784 - 393651 | 107731.0 |
| adenosylhomocysteinase | A5CPYCFAH4_03590 | B3QMF5 | - | 393950 - 395731 | 65524.4 |
| ai-2e family transporter | A5CPYCFAH4_03600 | O32095 | - | 395731 - 396837 | 40168.6 |
| phosphatidylserine decarboxylase | A5CPYCFAH4_03610 | B3ESH0 | - | 396853 - 397524 | 25521.6 |
| phosphatidate cytidylyltransferase | A5CPYCFAH4_03620 | P73548 | - | 397546 - 398382 | 29858.5 |
| atp-dependent zinc metalloprotease ftsh | A5CPYCFAH4_03630 | A6LD25 | - | 398394 - 400526 | 78807.6 |
| ribosomal silencing factor rsfs | A5CPYCFAH4_03640 | Q9KD89 | - | 400535 - 400885 | 13046.6 |
| transcriptional regulator | A5CPYCFAH4_03650 | Q9X725 | - | 401119 - 402018 | 33393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.