Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | 3BBH6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii subsp. vulgaris 3BBH6
Accession NumberAP019734.1
Gene Summary
Adenine Count
737674 bp
Thymine Count
735375 bp
Guanine Count
1014129 bp
Cytosine Count
1020314 bp
Genome Length
3507492 bp
Protein-coding Genes
2923 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent oxidoreductase | A3BBH6_07670 | Q6GJR6 | - | 878144 - 878890 | 27954.4 |
| diaminopimelate epimerase | A3BBH6_07680 | A6GYX5 | + | 879027 - 879833 | 29093.3 |
| hypothetical protein | A3BBH6_07690 | Not Available | + | 879853 - 880056 | 7901.02 |
| alpha/beta hydrolase | A3BBH6_07700 | A0KF11 | + | 880067 - 880864 | 29143.3 |
| hypothetical protein | A3BBH6_07710 | Not Available | + | 880994 - 882721 | 67585.9 |
| transcriptional regulator | A3BBH6_07720 | Not Available | + | 882868 - 883149 | 10728.6 |
| peptidase | A3BBH6_07730 | P25894 | + | 883267 - 884076 | 28795.3 |
| formamidopyrimidine-dna glycosylase | A3BBH6_07740 | Q817G5 | - | 884286 - 885113 | 29965.8 |
| hypothetical protein | A3BBH6_07750 | Not Available | - | 885551 - 885760 | 7654.34 |
| 5s ribosomal rna | Not Available | Not Available | + | 886038 - 886146 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.