Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | Spb1_09010 | A9B5I3 | + | 1115480 - 1116358 | 32306.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive | Spb1_09020 | P00888 | - | 1116427 - 1117503 | 39380.4 |
| aspartate aminotransferase | Spb1_09030 | Q59228 | - | 1117788 - 1119011 | 43707.4 |
| hypothetical protein | Spb1_09040 | Not Available | + | 1119726 - 1120022 | 9487.72 |
| fosmidomycin resistance protein | Spb1_09050 | P52067 | - | 1120180 - 1121493 | 46379.4 |
| transcriptional regulatory protein zrar | Spb1_09060 | Q06065 | + | 1122085 - 1123620 | 56696.2 |
| hypothetical protein | Spb1_09070 | Not Available | - | 1123823 - 1123942 | 4630.79 |
| serine/threonine-protein kinase pkn1 | Spb1_09080 | A0A0H3MBJ2 | - | 1124045 - 1125475 | 50614.7 |
| hypothetical protein | Spb1_09090 | Not Available | - | 1125672 - 1127507 | 66468.5 |
| oxygen-independent coproporphyrinogen-iii oxidase 1 | Spb1_09100 | O67886 | + | 1128086 - 1129483 | 52767.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
