Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | Spb1_18650 | B9LZ61 | + | 2298967 - 2299908 | 33522.7 |
| porin o precursor | Spb1_18660 | P33976 | + | 2300173 - 2301753 | 59541.9 |
| hypothetical protein | Spb1_18670 | Not Available | + | 2302022 - 2304952 | 109397.0 |
| hypothetical protein | Spb1_18680 | Not Available | + | 2305132 - 2306766 | 60514.6 |
| putative oxidoreductase ycjs | Spb1_18690 | B2VJP4 | - | 2307043 - 2308350 | 48100.2 |
| l-ribulose-5-phosphate 3-epimerase ulae | Spb1_18700 | Q57GJ5 | + | 2308641 - 2309570 | 33548.9 |
| outer membrane protein (omph-like) | Spb1_18710 | Not Available | + | 2309633 - 2310499 | 31135.0 |
| large cysteine-rich periplasmic protein omcb | Spb1_18720 | P23603 | + | 2310921 - 2312774 | 64451.9 |
| crispr-associated endonuclease cas9 | Spb1_18730 | Not Available | - | 2312942 - 2313538 | 22923.6 |
| Trna-pseudo | Not Available | Not Available | + | 2313732 - 2313807 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
