Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic repressor cpxp | Spb1_13400 | Not Available | - | 1611211 - 1611987 | 28078.1 |
| fatty acid metabolism regulator protein | Spb1_13410 | P94548 | + | 1612336 - 1613058 | 27275.7 |
| multidrug resistance protein mdta precursor | Spb1_13420 | C9XVZ5 | + | 1613096 - 1614673 | 56295.8 |
| multidrug resistance protein mdtb | Spb1_13430 | P25197 | + | 1614670 - 1617858 | 117473.0 |
| coa binding domain protein | Spb1_13440 | P75874 | - | 1617903 - 1618292 | 13782.7 |
| hypothetical protein | Spb1_13450 | Not Available | - | 1618333 - 1618923 | 23222.1 |
| 5-dehydro-2-deoxygluconokinase | Spb1_13460 | Q55480 | - | 1619092 - 1620078 | 34828.6 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | Spb1_13470 | Q9HWS0 | + | 1620403 - 1621743 | 49144.8 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | Spb1_13480 | A4SQX1 | - | 1621821 - 1623833 | 73863.4 |
| hypothetical protein | Spb1_13490 | Not Available | - | 1623985 - 1626168 | 81344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
