Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin arginine translocase protein a | Spb1_34870 | D4GVK4 | - | 4404944 - 4405126 | 6642.2 |
| hypothetical protein | Spb1_34880 | Not Available | - | 4405566 - 4405715 | 5649.03 |
| hypothetical protein | Spb1_34890 | Not Available | - | 4405728 - 4406987 | 45712.2 |
| hypothetical protein | Spb1_34900 | Not Available | - | 4407168 - 4407293 | 4745.6 |
| methionyl-trna formyltransferase | Spb1_34910 | Q4KKR0 | + | 4407604 - 4408608 | 36180.7 |
| glucosamine-6-phosphate deaminase | Spb1_34920 | C6DBY4 | + | 4408729 - 4409679 | 35385.4 |
| endo-1,4-beta-xylanase/feruloyl esterase precursor | Spb1_34930 | D5EXZ4 | + | 4409733 - 4411655 | 72079.2 |
| 10 kda chaperonin 1 | Spb1_34940 | A6LJ31 | + | 4411764 - 4412120 | 13475.4 |
| outer membrane biogenesis protein bamb | Spb1_34950 | Q63UT0 | + | 4412383 - 4413900 | 55158.4 |
| cytochrome c | Spb1_34960 | Not Available | + | 4414058 - 4417312 | 120235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
