Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase | Spb1_33970 | Q7UKV0 | - | 4277108 - 4277683 | 20180.5 |
| 50s ribosomal protein l25 | Spb1_33980 | Q7UKU9 | - | 4277887 - 4278537 | 23295.4 |
| outer membrane biogenesis protein bamb | Spb1_33990 | Q7CJM5 | + | 4279138 - 4284075 | 181620.0 |
| protoheme ix farnesyltransferase 2 | Spb1_34000 | A0B8A0 | + | 4284217 - 4285125 | 31914.9 |
| hypothetical protein | Spb1_34010 | Not Available | - | 4285337 - 4285678 | 11473.5 |
| formamidopyrimidine-dna glycosylase | Spb1_34020 | B8G9X1 | - | 4286056 - 4286961 | 33426.4 |
| hypothetical protein | Spb1_34030 | Not Available | + | 4287478 - 4289205 | 62064.1 |
| ktr system potassium uptake protein b | Spb1_34040 | P43440 | - | 4289359 - 4291209 | 66064.0 |
| hypothetical protein | Spb1_34050 | Q5RFU0 | + | 4291457 - 4292956 | 54268.5 |
| 5-aminovalerate aminotransferase davt | Spb1_34060 | P30268 | - | 4293199 - 4294698 | 55504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
