Planctopirus ephydatiae spb1

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctopirus

Description

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctopirus
SpeciesPlanctopirus ephydatiae
Strainspb1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctopirus ephydatiae spb1

Accession NumberCP036299.1

Gene Summary

Adenine Count

1212758 bp

Thymine Count

1196667 bp

Guanine Count

1393894 bp

Cytosine Count

1410742 bp

Genome Length

5214061 bp

Protein-coding Genes

4038 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
1-deoxy-d-xylulose-5-phosphate synthaseSpb1_32270Q7UWB7-4069394 - 407128668729.2
farnesyl diphosphate synthaseSpb1_32280B1XJV9-4071514 - 407247033805.5
cysteine--trna ligaseSpb1_32290Q7US70+4072776 - 407432957518.7
hypothetical proteinSpb1_32300Not Available+4074369 - 407521131787.5
crossover junction endodeoxyribonuclease ruvcSpb1_32310Q7US71+4075217 - 407572918191.1
serine/threonine-protein kinase pknbSpb1_32320Q8R9T6+4075882 - 407862699568.3
holliday junction atp-dependent dna helicase ruvaSpb1_32330Q7USB0+4079044 - 407966723433.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseSpb1_32340Q31P19-4079703 - 408017916993.5
pega domain proteinSpb1_32350Not Available+4080318 - 408074616230.7
ribonuclease rSpb1_32360O32231+4080945 - 408337190466.6

Displaying genes 3211 – 3220 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites