Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis lipoprotein apbe precursor | Spb1_31170 | A5F5Y3 | - | 3925503 - 3926918 | 52151.1 |
| 4fe-4s binding domain protein | Spb1_31180 | Not Available | - | 3926948 - 3928864 | 69654.0 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | Spb1_31190 | Not Available | - | 3928861 - 3931152 | 84001.9 |
| Trna-gly | Not Available | Not Available | + | 3931596 - 3931666 | Not Available |
| outer membrane biogenesis protein bamb | Spb1_31210 | Not Available | - | 3931773 - 3936314 | 167475.0 |
| 5s ribosomal rna | Not Available | Not Available | + | 3936394 - 3936503 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3936623 - 3939422 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3939964 - 3940036 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3940218 - 3940294 | Not Available |
| oxidoreductase family, nad-binding rossmann fold | Spb1_31260 | Not Available | - | 3940575 - 3941702 | 42432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
