Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Spb1_29670 | Not Available | - | 3729004 - 3729657 | 23303.6 |
| hypothetical protein | Spb1_29680 | P50619 | - | 3729790 - 3730428 | 23781.2 |
| indole-3-glycerol phosphate synthase | Spb1_29690 | Q7UKJ7 | - | 3730462 - 3731283 | 29729.1 |
| caax amino terminal protease self- immunity | Spb1_29700 | Not Available | + | 3731367 - 3732344 | 35684.6 |
| tyrosine--trna ligase | Spb1_29710 | Q2RHS8 | + | 3732471 - 3733715 | 45817.5 |
| 1,5-anhydro-d-fructose reductase | Spb1_29720 | Q9WYP5 | + | 3733804 - 3734847 | 37573.0 |
| swarming motility protein ybia | Spb1_29730 | Q5UR67 | + | 3734925 - 3735479 | 20971.7 |
| dna topoisomerase 1 | Spb1_29740 | P34185 | - | 3735504 - 3738191 | 99022.8 |
| hypothetical protein | Spb1_29750 | Not Available | + | 3738537 - 3741266 | 99061.5 |
| hypothetical protein | Spb1_29760 | Not Available | + | 3741303 - 3741437 | 4843.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
