Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligoendopeptidase f, plasmid | Spb1_27870 | Q8E0C9 | - | 3493034 - 3494857 | 68208.1 |
| tetracycline resistance protein, class b | Spb1_27880 | P02982 | + | 3495163 - 3496467 | 45843.8 |
| trehalose utilization | Spb1_27890 | Not Available | - | 3496683 - 3500999 | 157333.0 |
| dna-binding transcriptional regulator csir | Spb1_27900 | Not Available | + | 3501538 - 3502560 | 38561.0 |
| d-threo-aldose 1-dehydrogenase | Spb1_27910 | Q04212 | - | 3502602 - 3503357 | 27511.9 |
| glycerol-3-phosphate dehydrogenase | Spb1_27920 | Q9HUH4 | - | 3503347 - 3504570 | 44240.0 |
| dtdp-glucose 4,6-dehydratase | Spb1_27930 | Q8NBZ7 | + | 3504888 - 3505868 | 36312.8 |
| hypothetical protein | Spb1_27940 | Not Available | + | 3505985 - 3507862 | 69479.6 |
| lipopolysaccharide core heptosyltransferase rfaq | Spb1_27950 | Q57336 | - | 3507901 - 3508965 | 39396.6 |
| macrolide export atp-binding/permease protein macb | Spb1_27960 | Q58902 | - | 3509015 - 3510364 | 49008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
