Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Spb1_26770 | Not Available | - | 3362318 - 3363517 | 43928.8 |
| hypothetical protein | Spb1_26780 | Not Available | - | 3363514 - 3365718 | 79351.0 |
| mota/tolq/exbb proton channel family protein | Spb1_26790 | Not Available | - | 3365780 - 3367369 | 58610.9 |
| hypothetical protein | Spb1_26800 | Not Available | + | 3367425 - 3367571 | 5369.04 |
| hypothetical protein | Spb1_26810 | Not Available | + | 3367595 - 3371551 | 150403.0 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | Spb1_26820 | Q9HWS0 | - | 3371643 - 3373073 | 52328.3 |
| dna mismatch repair protein mutl | Spb1_26830 | C0RKF6 | + | 3373235 - 3375313 | 77243.8 |
| shikimate dehydrogenase | Spb1_26840 | Q9SQT8 | + | 3375413 - 3376918 | 55671.0 |
| shikimate kinase | Spb1_26850 | Q67N09 | + | 3376915 - 3377469 | 20465.6 |
| leader peptidase pppa | Spb1_26860 | A2T195 | + | 3377656 - 3378960 | 48756.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
