Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase superfamily protein | Spb1_25770 | P49426 | - | 3219222 - 3222041 | 103744.0 |
| acetyl xylan esterase (axe1) | Spb1_25780 | O34973 | - | 3222064 - 3224196 | 78286.2 |
| hypothetical protein | Spb1_25790 | Not Available | + | 3224581 - 3226278 | 64288.9 |
| hypothetical protein | Spb1_25800 | Not Available | + | 3226399 - 3227748 | 49071.2 |
| wd domain, g-beta repeat | Spb1_25810 | Q99973 | + | 3227775 - 3228833 | 38626.7 |
| dna polymerase/3'-5' exonuclease polx | Spb1_25820 | P94544 | + | 3229267 - 3230979 | 62653.3 |
| hypothetical protein | Spb1_25830 | Not Available | + | 3231364 - 3231738 | 14013.5 |
| hypothetical protein | Spb1_25840 | Not Available | - | 3231810 - 3232031 | 8200.03 |
| atp-dependent clp protease atp-binding subunit clpx | Spb1_25850 | Q7UKU7 | + | 3232079 - 3233362 | 46803.4 |
| glycogen accumulation regulator gara | Spb1_25860 | P46017 | + | 3233770 - 3234576 | 28477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
