Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | Spb1_25270 | Q8UGL3 | + | 3151588 - 3152604 | 37366.7 |
| putative cysteine protease yraa | Spb1_25280 | O28987 | + | 3152732 - 3153298 | 21392.8 |
| valine--pyruvate aminotransferase | Spb1_25290 | P09053 | - | 3153412 - 3154692 | 46894.9 |
| nitrogen fixation protein vnfa | Spb1_25300 | Q06065 | + | 3155228 - 3156280 | 38877.8 |
| glycerate dehydrogenase | Spb1_25310 | O27051 | - | 3156335 - 3157282 | 34088.2 |
| hypothetical protein | Spb1_25320 | Not Available | + | 3157825 - 3159153 | 49129.9 |
| xylose isomerase-like tim barrel | Spb1_25330 | Q58707 | + | 3159332 - 3160195 | 31433.4 |
| segregation and condensation protein a | Spb1_25340 | A7Z671 | + | 3160385 - 3161158 | 29377.9 |
| hypothetical protein | Spb1_25350 | Not Available | + | 3161269 - 3161718 | 16726.0 |
| hypothetical protein | Spb1_25360 | Not Available | - | 3161711 - 3162091 | 14060.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
