Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-n-acetylmuramic acid deacetylase pdac | Spb1_23870 | Q81EK9 | - | 2951359 - 2952114 | 28228.6 |
| hypothetical protein | Spb1_23880 | Not Available | - | 2952183 - 2953703 | 55648.5 |
| cytochrome c6 | Spb1_23890 | Not Available | - | 2953756 - 2956647 | 105910.0 |
| cobalt-zinc-cadmium resistance protein czcc precursor | Spb1_23900 | Not Available | - | 2956928 - 2958499 | 57857.1 |
| cobalt-zinc-cadmium resistance protein czca | Spb1_23910 | P94177 | - | 2958598 - 2961747 | 114172.0 |
| cobalt-zinc-cadmium resistance protein czcb | Spb1_23920 | P13510 | - | 2961817 - 2963328 | 55405.7 |
| hypothetical protein | Spb1_23930 | Not Available | + | 2963635 - 2964144 | 18929.5 |
| bifunctional ligase/repressor bira | Spb1_23940 | P29906 | + | 2964663 - 2965529 | 32330.7 |
| rna recognition motif (rrm, rbd, or rnp domain) | Spb1_23950 | Q9WX37 | + | 2965928 - 2966371 | 13960.8 |
| rhomboid protease glup | Spb1_23960 | O14364 | + | 2966834 - 2967724 | 33587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
