Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | Spb1_23370 | Q9HU21 | - | 2888304 - 2888849 | 20558.3 |
| phosphoheptose isomerase 1 | Spb1_23380 | Q58731 | - | 2888846 - 2889460 | 22653.9 |
| hypothetical protein | Spb1_23390 | Not Available | - | 2889643 - 2890515 | 31805.3 |
| ammonia channel precursor | Spb1_23400 | O28525 | - | 2890815 - 2892353 | 53356.4 |
| inositol 2-dehydrogenase | Spb1_23410 | B5F3F4 | + | 2893161 - 2894612 | 53215.9 |
| thiol-disulfide oxidoreductase | Spb1_23420 | Q63DQ8 | - | 2894733 - 2896769 | 75727.5 |
| hypothetical protein | Spb1_23430 | Not Available | + | 2896986 - 2898500 | 57125.5 |
| serine/threonine-protein kinase pknb | Spb1_23440 | P54744 | - | 2898573 - 2900120 | 56046.3 |
| thiol-disulfide oxidoreductase | Spb1_23450 | O31820 | + | 2900567 - 2901277 | 26785.8 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | Spb1_23460 | P46322 | + | 2901395 - 2901976 | 21582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
