Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucan endo-1,3-beta-glucosidase a1 precursor | Spb1_20970 | P23903 | - | 2578523 - 2579509 | 36800.8 |
| phosphodiesterase | Spb1_20980 | Q58346 | - | 2579639 - 2580130 | 17690.4 |
| fist n domain protein | Spb1_20990 | P9WKS6 | - | 2580174 - 2581370 | 42475.7 |
| hypothetical protein | Spb1_21000 | Not Available | - | 2581469 - 2582296 | 29971.6 |
| protease 4 | Spb1_21010 | Q9C9C0 | + | 2582882 - 2584816 | 69281.9 |
| oligopeptide-binding protein appa precursor | Spb1_21020 | P42061 | + | 2584993 - 2587596 | 97035.3 |
| dipeptide transport system permease protein dppb | Spb1_21030 | P42062 | + | 2587674 - 2588678 | 37348.8 |
| glutathione transport system permease protein gsid | Spb1_21040 | P42063 | + | 2588678 - 2590408 | 63357.4 |
| hypothetical protein | Spb1_21050 | Not Available | + | 2590374 - 2590658 | 11114.6 |
| acetolactate synthase large subunit ilvb1 | Spb1_21060 | P27819 | + | 2590803 - 2592584 | 65044.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
