Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase chain 5 | Spb1_19870 | B7J7U3 | - | 2449494 - 2450033 | 20632.6 |
| nad(p)h-quinone oxidoreductase subunit 3 | Spb1_19880 | Q3ASW8 | - | 2450064 - 2450609 | 20016.2 |
| hypothetical protein | Spb1_19890 | Not Available | - | 2450711 - 2451373 | 23462.4 |
| nadh-quinone oxidoreductase subunit i | Spb1_19900 | A0RMD6 | - | 2451690 - 2452220 | 19958.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | Spb1_19910 | Q7UMZ2 | + | 2452479 - 2453504 | 36515.1 |
| nucleoside 2-deoxyribosyltransferase | Spb1_19920 | Not Available | - | 2453494 - 2454336 | 31014.3 |
| hypothetical protein | Spb1_19930 | Not Available | + | 2454479 - 2456836 | 88212.9 |
| hypothetical protein | Spb1_19940 | Not Available | + | 2456879 - 2457394 | 17838.3 |
| arginine--trna ligase | Spb1_19950 | Q7URC7 | - | 2457413 - 2459395 | 73820.5 |
| ribosomal silencing factor rsfs | Spb1_19960 | P73658 | - | 2459483 - 2459917 | 16327.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
