Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 2-phosphosulfolactate phosphatase | Spb1_19770 | A4XFZ6 | + | 2437128 - 2437874 | 26802.3 |
| nifu-like protein | Spb1_19780 | O32163 | + | 2438073 - 2438501 | 15943.0 |
| putative cysteine desulfurase | Spb1_19790 | O32164 | + | 2438593 - 2439897 | 47078.3 |
| n5-carboxyaminoimidazole ribonucleotide mutase | Spb1_19800 | O06456 | + | 2440080 - 2440643 | 20126.7 |
| n5-carboxyaminoimidazole ribonucleotide synthase | Spb1_19810 | P12045 | + | 2440640 - 2441803 | 41681.9 |
| error-prone dna polymerase | Spb1_19820 | Q7UXK9 | - | 2441840 - 2444920 | 116387.0 |
| dna polymerase iv | Spb1_19830 | Q9A3J2 | - | 2444923 - 2446344 | 53962.0 |
| recombinase a | Spb1_19840 | Q9A3J1 | - | 2446373 - 2447131 | 27731.3 |
| putative sos response-associated peptidase yedk | Spb1_19850 | O31916 | + | 2447249 - 2447923 | 25388.4 |
| nadh-quinone oxidoreductase subunit 4 | Spb1_19860 | B4SBZ0 | - | 2448180 - 2449430 | 46189.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
