Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospholipase ytpa | Spb1_19370 | O34705 | - | 2388238 - 2389197 | 36286.5 |
| putative glycosyltransferase epsd | Spb1_19380 | P71053 | + | 2389528 - 2390646 | 41859.5 |
| general stress protein 16o | Spb1_19390 | O66611 | + | 2391026 - 2391484 | 17199.1 |
| inositol 2-dehydrogenase | Spb1_19400 | Q8ECL7 | + | 2391858 - 2393252 | 52088.1 |
| hypothetical protein | Spb1_19410 | Not Available | + | 2393465 - 2394163 | 25485.5 |
| formaldehyde-activating enzyme | Spb1_19420 | Q9FA38 | - | 2394357 - 2394854 | 17478.2 |
| hypothetical protein | Spb1_19430 | Not Available | + | 2395202 - 2395360 | 5815.98 |
| xylose isomerase | Spb1_19440 | Q7UVG2 | - | 2395354 - 2396667 | 48833.8 |
| hypothetical protein | Spb1_19450 | Not Available | - | 2396883 - 2398721 | 69493.9 |
| hypothetical protein | Spb1_19460 | Not Available | + | 2399194 - 2400063 | 32357.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
