Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Spb1_19270 | Not Available | - | 2376480 - 2377145 | 24947.3 |
| l-aspartate oxidase | Spb1_19280 | Q8ZMX9 | - | 2377209 - 2378846 | 60005.5 |
| integration host factor subunit beta | Spb1_19290 | Q31F20 | + | 2379192 - 2379695 | 18008.4 |
| hypothetical protein | Spb1_19300 | Not Available | + | 2380061 - 2380282 | 8310.14 |
| hypothetical protein | Spb1_19310 | Not Available | + | 2380702 - 2381190 | 17614.0 |
| prenyltransferase and squalene oxidase repeat protein | Spb1_19320 | Not Available | + | 2381228 - 2382307 | 39784.4 |
| hypothetical protein | Spb1_19330 | Not Available | + | 2382352 - 2383629 | 47443.6 |
| hypothetical protein | Spb1_19340 | Not Available | + | 2383722 - 2385587 | 70669.4 |
| colicin v production protein | Spb1_19350 | Not Available | - | 2385650 - 2386879 | 44718.4 |
| hypothetical protein | Spb1_19360 | Not Available | - | 2387045 - 2388025 | 35540.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
