Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase / dehydrase and lipid transport | Spb1_19070 | Not Available | - | 2351794 - 2352465 | 24290.8 |
| hypothetical protein | Spb1_19080 | Not Available | - | 2352524 - 2352877 | 13464.1 |
| d-tagatose 3-epimerase | Spb1_19090 | Q9WYP7 | - | 2352990 - 2353814 | 29659.6 |
| phosphoglycerate kinase | Spb1_19100 | Q7UEX1 | - | 2354028 - 2355230 | 42375.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | Spb1_19110 | Q9C6B3 | + | 2355400 - 2355972 | 20685.7 |
| hypothetical protein | Spb1_19120 | Not Available | + | 2356098 - 2357807 | 62554.5 |
| ecf rna polymerase sigma-e factor | Spb1_19130 | P0AGB8 | + | 2358107 - 2358835 | 27756.2 |
| hypothetical protein | Spb1_19140 | Not Available | + | 2358832 - 2359206 | 13804.3 |
| hypothetical protein | Spb1_19150 | Not Available | + | 2359398 - 2359814 | 15897.5 |
| hypothetical protein | Spb1_19160 | Not Available | + | 2360057 - 2360695 | 22936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
