Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional transcriptional activator/dna repair enzyme ada | Spb1_17250 | P06134 | + | 2120712 - 2121350 | 22912.8 |
| hypothetical protein | Spb1_17260 | Not Available | - | 2122086 - 2123894 | 66799.3 |
| gh3 auxin-responsive promoter | Spb1_17270 | Q9LQ68 | - | 2124171 - 2125931 | 66088.7 |
| hypothetical protein | Spb1_17280 | Not Available | - | 2126241 - 2126675 | 16734.5 |
| sodium:neurotransmitter symporter family protein | Spb1_17290 | Q58715 | + | 2126982 - 2129042 | 76013.6 |
| putative protein kinase ubib | Spb1_17300 | P73627 | + | 2129210 - 2130880 | 62658.5 |
| epimerase family protein | Spb1_17310 | P73467 | - | 2130924 - 2131865 | 34073.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | Spb1_17320 | Q3MAV9 | + | 2132301 - 2133626 | 47109.3 |
| ribosomal rna small subunit methyltransferase b | Spb1_17330 | P72943 | + | 2133623 - 2135887 | 82514.5 |
| Trna-arg | Not Available | Not Available | + | 2135979 - 2136052 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
