Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase pkn1 | Spb1_15230 | Q7AJA5 | - | 1871529 - 1872608 | 40743.1 |
| thiamine biosynthesis lipoprotein apbe precursor | Spb1_15240 | P41780 | + | 1873045 - 1874265 | 44038.6 |
| hypothetical protein | Spb1_15250 | Not Available | - | 1874253 - 1874750 | 18408.7 |
| squalene--hopene cyclase | Spb1_15260 | A0A2Z4HPY4 | - | 1874788 - 1876869 | 76669.8 |
| cytochrome c | Spb1_15270 | P42351 | + | 1877496 - 1880915 | 126958.0 |
| lipopolysaccharide core heptose(i) kinase rfap | Spb1_15280 | Q06995 | - | 1881248 - 1882054 | 31290.1 |
| lipopolysaccharide core biosynthesis protein rfag | Spb1_15290 | P25740 | - | 1882035 - 1883180 | 42732.9 |
| adp-heptose--lps heptosyltransferase 2 | Spb1_15300 | P37692 | - | 1883194 - 1884258 | 38631.8 |
| bifunctional protein hlde | Spb1_15310 | Q74BF6 | - | 1884255 - 1885817 | 56363.1 |
| homoserine kinase | Spb1_15320 | Q5FUH8 | - | 1886093 - 1887337 | 46214.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
