Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Spb1_14000 | Not Available | + | 1714368 - 1714727 | 13002.8 |
| 3-deoxy-d-manno-octulosonic-acid kinase | Spb1_14010 | Not Available | + | 1714847 - 1716739 | 71433.7 |
| hypothetical protein | Spb1_14020 | Not Available | + | 1716736 - 1717713 | 37121.7 |
| hypothetical protein | Spb1_14030 | Not Available | + | 1717901 - 1719178 | 46684.1 |
| leucine rich repeats (2 copies) | Spb1_14040 | Not Available | - | 1719282 - 1719941 | 23593.8 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | Spb1_14050 | Q6FYD4 | - | 1720184 - 1721437 | 43716.1 |
| 2-oxoglutarate dehydrogenase e1 component | Spb1_14060 | P20707 | - | 1721639 - 1724686 | 114583.0 |
| comec family competence protein | Spb1_14070 | Not Available | + | 1725282 - 1726382 | 39921.9 |
| pilz domain protein | Spb1_14080 | Not Available | + | 1726706 - 1727122 | 15517.3 |
| chaperone protein dnak | Spb1_14090 | Q15WH0 | - | 1727190 - 1730075 | 106384.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
