Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus ephydatiae |
| Strain | spb1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus ephydatiae spb1
Accession NumberCP036299.1
Gene Summary
Adenine Count
1212758 bp
Thymine Count
1196667 bp
Guanine Count
1393894 bp
Cytosine Count
1410742 bp
Genome Length
5214061 bp
Protein-coding Genes
4038 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor nics | Spb1_12440 | Q88FX7 | + | 1523873 - 1524532 | 24733.9 |
| ftsx-like permease family protein | Spb1_12450 | P9WG16 | + | 1524601 - 1525761 | 42761.7 |
| lipoprotein-releasing system atp-binding protein lold | Spb1_12460 | Q57QD7 | + | 1525923 - 1526717 | 28670.8 |
| multidrug resistance protein mdtn | Spb1_12470 | Q9ZJD1 | + | 1526717 - 1527961 | 45792.7 |
| dna-directed rna polymerase subunit beta' | Spb1_12480 | Q7URW4 | + | 1528267 - 1532550 | 158929.0 |
| 30s ribosomal protein s12 | Spb1_12490 | B5RLU7 | + | 1532870 - 1533241 | 13887.4 |
| 30s ribosomal protein s7 | Spb1_12500 | Q7UN31 | + | 1533370 - 1533843 | 17685.3 |
| elongation factor g | Spb1_12510 | B7IHU3 | + | 1534076 - 1536151 | 75885.1 |
| 30s ribosomal protein s10 | Spb1_12520 | Q7UN22 | + | 1536325 - 1536651 | 12150.9 |
| 50s ribosomal protein l3 | Spb1_12530 | Q7UN20 | + | 1536773 - 1537471 | 24936.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
