Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilp | EUB48_03805 | G3XCX7 | + | 794140 - 794682 | 19834.0 |
| type iv pilus secretin pilq | EUB48_03810 | P34750 | + | 794683 - 796860 | 76642.4 |
| shikimate kinase | EUB48_03815 | A1TKW2 | + | 796868 - 797395 | 19661.8 |
| 3-dehydroquinate synthase | EUB48_03820 | Q0K669 | + | 797453 - 798577 | 39409.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | EUB48_03825 | Q8XV63 | + | 798624 - 799790 | 44102.1 |
| mfs transporter | EUB48_03830 | P17583 | + | 799846 - 801096 | 43370.9 |
| duf1415 domain-containing protein | EUB48_03835 | Not Available | + | 801116 - 801700 | 21554.7 |
| sam-dependent methyltransferase | EUB48_03840 | Not Available | + | 801697 - 802593 | 32938.0 |
| antibiotic biosynthesis monooxygenase | EUB48_03845 | P94425 | + | 802728 - 803015 | 10104.1 |
| hypothetical protein | EUB48_03850 | Not Available | - | 803054 - 803482 | 15869.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
